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workshop:2011:schedule

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workshop:2011:schedule [2010/09/27 12:59]
lessem 		workshop:2011:schedule [2011/03/10 16:47] (current)
lessem
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 The Workshop schedule is constantly changing, even during the course.  Updates are made to fine tune content to the students' needs. The Workshop schedule is constantly changing, even during the course.  Updates are made to fine tune content to the students' needs.
  
-The current schedule is very preliminary and represents general topics expected to be covered, but does not contain details on exact sessions, practicals, or lecturers. +The current schedule is preliminary and represents topics expected to be covered with details of the expected lecturers and practicals.
 ===== Schedule ===== ===== Schedule =====
 +
 +===Sunday, March 6, 2011===
 +^Time ^Topic ^Lecturers|
 +^16:00-18:00 |  Reception in the Boulder Creek Living Room  ||
  
 ===Monday, March 7, 2011=== ===Monday, March 7, 2011===
-//Linkage// Manuel Ferreira, David Evans+//Linkage//
 ^Time ^Topic ^Lecturers| ^Time ^Topic ^Lecturers|
-^ 9:00-10:30 | Introduction | Nick Martin| +^ 8:00-8:50 | Optional Review: Linux/Unix Operating System | Sarah Medland| 
-^10:30-11:00 | Coffee break|| +^ 9:00-10:15 | Overview:  Historical context and current challenges | Nick Martin| 
-^ 11:00-12:30 | Intro to genetics, statistics, and R | John Rice, Pak Sham, Matt Keller| +^10:15-10:30 | Introduction to computer system | Jeff Lessem | 
-^12:30-13:30 | Lunch || +^10:30-11:00 |  Coffee break  || 
-^13:30-15:00 | Linkage | Manuel Ferreira, David Evans| +^ 11:00-12:30 | Introduction to genetics and statistics | John Rice, Pak Sham | 
-^15:00-15:30 | Coffee break|| +^12:30-13:30 |  Lunch  || 
-^15:30-17:00 | Linkage | Manuel Ferreira, David Evans|+^13:30-15:00 | Linkage: Biometrical model and priciples | Manuel Ferreira, David Evans, Stacey Cherny| 
 +^15:00-15:30 |  Coffee break  || 
 +^15:30-17:00 | Linkage: IBD estimation, Merlin | David Evans, Manuel Ferreira, Stacey Cherny| 
 +^17:30-19:00 |  Reception in the Boulder Creek Living Room  ||
  
 === Tuesday, March 8, 2011 === === Tuesday, March 8, 2011 ===
-//GWAS// Shaun Purcell, Jeff Barrett+//GWAS//
 ^Time ^Topic ^Lecturers| ^Time ^Topic ^Lecturers|
 ^ 8:00-9:00 | Optional Review: R | Sarah Medland| ^ 8:00-9:00 | Optional Review: R | Sarah Medland|
-^ 9:00-10:30 | GWAS: Introduction & Data Management | | +^ 9:00-10:30 | GWAS: Introduction & Data Management Practical| Jeff Barrett, Shaun Purcell, Meike Bartels | 
-^ 10:30-11:00 | Coffee break|| +^ 10:30-11:00 |  Coffee break  || 
-^ 11:00-12:30 | GWAS: Association Tests & Stratification | | +^ 11:00-12:30 | GWAS: Association Tests & Stratification | David Evans, Jeff Barrett| 
-^12:30-13:30 | Lunch || +^12:30-13:30 |  Lunch  || 
-^13:30-15:30 | GWAS: Haplotype Analysis & Imputation | | +^13:30-15:30 | GWAS: Haplotype Analysis & Imputation | Jeff Barrett, Sarah Medland| 
-^15:00-15:30 | Coffee break|| +^15:00-15:30 |  Coffee break  || 
-^15:30-17:00 | GWAS: Power, Meta-analysis & Mega-analysis| |+^15:30-17:00 | GWAS: Power & Meta-analysis|Ben Neale, Pak Sham | 
 +^17:30-19:00 |  Reception in the Boulder Creek Living Room  ||
  
 === Wednesday, March 9, 2011 === === Wednesday, March 9, 2011 ===
-//GWAS// Shaun Purcell, Jeff Barrett +//GWAS//\\ 
-//Sequencing// Ben Neale, Goncalo Abecasis+//Sequencing//
 ^Time ^Topic ^Lecturers| ^Time ^Topic ^Lecturers|
-^ 8:00-9:00 | Optional Review: R | Sarah Medland| +^ 8:00-9:00 | Optional Review: Family based analyses| Sarah Medland| 
-^ 9:00-10:30 | GWAS: CNV Analysis | | +^ 9:00-10:30 | GWAS: CNV Analysis | Manuel Ferreira, Clara Tang | 
-^ 10:30-11:00 | Coffee break|| +^ 10:30-11:00 |  Coffee break  || 
-^ 11:00-12:30 | GWAS: Genes/Networks/Total Polygenic| Danielle Posthuma| +^ 11:00-12:30 | GWAS: Pathways/Networks/Multilocus analyses| Danielle Posthuma, Sarah Medland, Pak Sham| 
-^12:30-13:30 | Lunch || +^12:30-13:30 |  Lunch  || 
-^13:30-15:00 | Sequencing | | +^13:30-15:00 | Introduction to sequence data generation | Kai Ye, Ben Neale | 
-^15:00-15:30 | Coffee break|| +^15:00-15:30 |  Coffee break  || 
-^15:30-17:00 | Sequencing | |+^15:30-17:00 | Mapping and alignment practical and variant calling | Hyun Min Kang, Kai Ye, Goncalo Abecasis |
  
 === Thursday, March 10, 2011 === === Thursday, March 10, 2011 ===
-//Sequencing// Ben Neale, Goncalo Abecasis+//Sequencing//
 ^Time ^Topic ^Lecturers| ^Time ^Topic ^Lecturers|
-^ 8:00-9:00 | Optional Review: R | Sarah Medland| +^ 8:00-9:00 | Optional Review: GCTA | Sarah Medland| 
-^ 9:00-10:30 | Sequencing | | +^ 9:00-10:30 | Visualization and QC of variant calls| Hyun Min Kang, Goncalo Abecasis | 
-^ 10:30-11:00 | Coffee break|| +^ 10:30-11:00 |  Coffee break  || 
-^ 11:00-12:30 | Sequencing | | +^ 11:00-12:00 | Rare variant testing approaches| Ben Neale, Shaun Purcell | 
-^12:30-13:30 | Lunch || +^12:00-12:30 | PSEQ practical| Shaun Purcell, Ben Neale | 
-^13:30-15:00 | Sequencing | | +^12:30-13:30 |  Lunch  || 
-^15:00-15:30 | Coffee break|| +^13:30-15:00 | contintued PSEQ practical| Shaun Purcell, Ben Neale | 
-^15:30-17:00 | Sequencing | |+^15:00-15:30 |  Coffee break  || 
 +^15:30-17:00 | 1,000 genomes, bioinformatics, annotation| Goncalo Abecasis, Hyun Min Kang |
  
 === Friday, March 11, 2011 === === Friday, March 11, 2011 ===
-//Phenotypic Modelling// Mike Neale+//Phenotypic Modelling//
 ^Time ^Topic ^Lecturers| ^Time ^Topic ^Lecturers|
-^ 8:00-9:00 | Optional Review: OpenMx | Sarah Medland, Matt Keller| +^ 9:00-9:45 | Introduction Phenomics | Nick Martin, Mike Neale | 
-^ 9:00-10:30 | Modeling Means & Population Stratification | Matt Keller Hermine Maes | +^ 9:45-10:30 | Phenotypic Factor Modeling | Hermine Maes, Meike Bartels | 
-^11:00-12:30 | Phenotypic Modeling | Sarah Medland, Mike Neale | +^ 10:30-11:00 |  Coffee break  || 
-^12:30-13:30 | Lunch || +^11:00-11:30 | Multivariate Association | Dorret Boomsma, Meike Bartels| 
-^13:30-15:00 | Multivariate/Longitudinal Analyses | Meika Bartels, Dorrett Boomsma | +^11:30-12:30 | Multivariate Association Practical | Meike Bartels, Hermine Maes | 
-^15:00-15:30 | Coffee break||+^12:30-13:30 |  Lunch   || 
 +^13:30-14:00 | GWAS with Family Data | Sarah Medland | 
 +^14:00-15:00 | Multivariate Categorical | Mike Neale, Sarah Medland | 
 +^15:00-15:30 |  Coffee break  ||
 ^15:30-17:00 | Wrap up | Lindon Eaves | ^15:30-17:00 | Wrap up | Lindon Eaves |
- 
  
workshop/2011/schedule.1285613990.txt.gz · Last modified: 2010/09/27 12:59 by lessem

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