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uk_biobank:phenotype_request [2016/04/08 11:51]
brooke_huibregtse
uk_biobank:phenotype_request [2016/06/09 22:35] (current)
brooke_huibregtse
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 **The research question you are planning to answer with the variables above:** **The research question you are planning to answer with the variables above:**
-Some measures of sexual behavior, including age of sexual initiation and lifetime number of partners, are risk factors for acquiring sexually transmitted infections, human immunodeficiency virus (HIV), and externalizing psychopathology such as drug use. Same sex partnerships correspond to differential risk for infection, due to varying rates of transmission across types of sex acts as well as population differences in prevalence of infection. Twin and family studies have demonstrated moderate heritabilites for a range of sexual behaviors, few studies have tested the extent to which these trait heritabilities are polygenic or tagged by common variants.  Genome wide analysis of these behaviors would inform theories regarding differing reproductive strategies, normative sexual behavior, and sexual behaviors that confer serious health risks. Predictors (risk taking and substance use) and outcomes (infections) are also requested for secondary analyses.+Some measures of sexual behavior, including age of sexual initiation and lifetime number of partners, are risk factors for acquiring sexually transmitted infections, human immunodeficiency virus (HIV), and externalizing psychopathology such as drug use. Same sex partnerships correspond to differential risk for infection, due to varying rates of transmission across types of sex acts as well as population differences in prevalence of infection. Twin and family studies have demonstrated moderate heritabilites for a range of sexual behaviors, few studies have tested the extent to which these trait heritabilities are polygenic or tagged by common variants.  Genome wide analysis of these behaviors would inform theories regarding differing reproductive strategies, normative sexual behavior, and sexual behaviors that confer serious health risks. Field ID 2149 (sensitive) is the major dependent variable of interest and is absolutely required. Field ID 3669 (sensitive) is required to test whether contextual factors (i.e. partner type, type of sex act) moderates risk. Field ID 2139 (sensitive) is highly correlated with number of partners, and is required to control for length of time participants have been sexually active. Predictors (risk taking and substance use) and outcomes (infections) are also requested for secondary analyses.
  
  
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 **The variable name, link to the variable, and Field ID for EACH variable, listed below:** **The variable name, link to the variable, and Field ID for EACH variable, listed below:**
  
-1. Home area population density http://biobank.ctsu.ox.ac.uk/crystal/field.cgi?id=20118 Field 20118+1. Home area population density http://biobank.ctsu.ox.ac.uk/crystal/field.cgi?id=20118 Field 20118
  
-2.  Length of time at current address http://biobank.ctsu.ox.ac.uk/crystal/field.cgi?id=699 Field 699+2.  Length of time at current address http://biobank.ctsu.ox.ac.uk/crystal/field.cgi?id=699 Field 699
  
-3. Own or rent accommodation lived in http://biobank.ctsu.ox.ac.uk/crystal/field.cgi?id=680 Field 680+3. Own or rent accommodation lived in http://biobank.ctsu.ox.ac.uk/crystal/field.cgi?id=680 Field 680
  
-4. Type of accommodation lived in http://biobank.ctsu.ox.ac.uk/crystal/field.cgi?id=670 Field 670+4. Type of accommodation lived in http://biobank.ctsu.ox.ac.uk/crystal/field.cgi?id=670 Field 670
  
-5. Current employment status http://biobank.ctsu.ox.ac.uk/crystal/field.cgi?id=6142 Field 6142+5. Current employment status http://biobank.ctsu.ox.ac.uk/crystal/field.cgi?id=6142 Field 6142
  
-6. Time employed in main current job http://biobank.ctsu.ox.ac.uk/crystal/field.cgi?id=757 Field 757+6. Time employed in main current job http://biobank.ctsu.ox.ac.uk/crystal/field.cgi?id=757 Field 757
  
 The research question you are planning to answer with the variables above: The research question you are planning to answer with the variables above:
 We are interested in doing a runs of homozygosity analysis in the UK Biobank data, assessing the relationship between these sociodemographic variables and autozygosity. Based on previous research and the ROH literature, we have reason to believe that various sociodemographic confounders can subtly bias the relationship between very distant inbreeding and psychiatric traits of interest, but many of our case-control datasets do not have these confounding variables measured, making it difficult to test the direction and strength of their influence. The variables listed above will allow us to test whether things like urban/rural location, education, employment, and other SES measures influence autozygosity and therefore could be influencing our ROH-psychiatric analyses. We are interested in doing a runs of homozygosity analysis in the UK Biobank data, assessing the relationship between these sociodemographic variables and autozygosity. Based on previous research and the ROH literature, we have reason to believe that various sociodemographic confounders can subtly bias the relationship between very distant inbreeding and psychiatric traits of interest, but many of our case-control datasets do not have these confounding variables measured, making it difficult to test the direction and strength of their influence. The variables listed above will allow us to test whether things like urban/rural location, education, employment, and other SES measures influence autozygosity and therefore could be influencing our ROH-psychiatric analyses.
  
uk_biobank/phenotype_request.1460137890.txt.gz ยท Last modified: 2016/04/08 11:51 by brooke_huibregtse