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--- uk_biobank:file_locations [2016/02/23 11:11]
lessem Created page with "The files are on RC in <pre> /work/KellerLab/UKBiobank </pre>"
+++ uk_biobank:file_locations [2016/02/24 21:45]
lessem
@@ Line 2: / Line 2: @@
   /work/KellerLab/UKBiobank
+The phenotypes are in an Rdata file that can be read in with a line such as
+  load(file="/work/KellerLab/UKBiobank/phenotypes/uk1653.Rdata")
+The data is all in an object called "bd".
+The raw genetic data is under the directory
+  /work/KellerLab/UKBiobank/genetics/raw
+it is in vcf.gz, bed, and UK Biobank cal format in the so named directories.

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