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===== Software ======
Links to software used at the course. 
  * [[https://www.cog-genomics.org/plink2/|plink version 1.9x]] or [[http://pngu.mgh.harvard.edu/~purcell/plink/|the old version 1.07]]
  * [[http://csg.sph.umich.edu/abecasis/MACH/|mach]]
  * [[http://csg.sph.umich.edu/abecasis/Metal/index.html|Metal]]
  * [[http://csg.sph.umich.edu/locuszoom/|LocusZoom]]
  * [[http://ctglab.nl/software/jag|JAG]]
  * [[http://ctglab.nl/software/jamp|JAMP]]
  * [[http://ctglab.nl/software/tates|TATES]]
  * [[https://atgu.mgh.harvard.edu/plinkseq/index.shtml|PSEQ]]
  * [[http://genome.sph.umich.edu/wiki/Minimac|Minimac]]
  * [[http://statgenpro.psychiatry.hku.hk/limx/kgg/|KGG]]
  * [[http://statgenpro.psychiatry.hku.hk/limx/kggseq/|KGGSeq]]
  * [[http://openmx.psyc.virginia.edu/|OpenMx]]
  * [[http://www.openbioinformatics.org/annovar/|ANNOVAR]]
  * [[http://www.complextraitgenomics.com/software/gcta/|GCTA]]
  * [[http://ctglab.nl/software/magma|MAGMA]]
===== Faculty Files =====
 These are the files the faculty used during the course. Both slides from presentations and examples from practicals are included. Completion of the practicals will require obtaining the appropriate software.

  * [[http://ibg.colorado.edu/cdrom2015/abdellaoui/|Abdel Abdellaoui]]
  * [[http://ibg.colorado.edu/cdrom2015/barrett/|Jeff Barrett]]
  * [[http://ibg.colorado.edu/cdrom2015/bartels/|Meike Bartels]]
  * [[http://ibg.colorado.edu/cdrom2015/beata/|Beata St. Pourcain]]
  * [[http://ibg.colorado.edu/cdrom2015/boomsma/|Dorret Boomsma]]
  * [[http://ibg.colorado.edu/cdrom2015/de Leeuw/|Christiaan de Leeuw]]
  * [[http://ibg.colorado.edu/cdrom2015/eaves/|Lindon Eaves]]
  * [[http://ibg.colorado.edu/cdrom2015/evans/|David Evans]]
  * [[http://ibg.colorado.edu/cdrom2015/ferreira/|Manuel Ferreira]]
  * [[http://ibg.colorado.edu/cdrom2015/howrigan/|Dan Howrigan]]
  * [[http://ibg.colorado.edu/cdrom2015/jansen/|Rick Jansen]]
  * [[http://ibg.colorado.edu/cdrom2015/keller/|Matt Keller]]
  * [[http://ibg.colorado.edu/cdrom2015/kirkpatrick/|Rob Kirkpatrick]]
  * [[http://ibg.colorado.edu/cdrom2015/lek/|Monkol Lek]]
  * [[http://ibg.colorado.edu/cdrom2015/li/|Miaoxin Li]]
  * [[http://ibg.colorado.edu/cdrom2015/martin/|Nick Martin]]
  * [[http://ibg.colorado.edu/cdrom2015/medland/|Sarah Medland]]
  * [[http://ibg.colorado.edu/cdrom2015/mornings/|Optional Morning Sessions]]
  * [[http://ibg.colorado.edu/cdrom2015/neale/|Mike Neale]]
  * [[http://ibg.colorado.edu/cdrom2015/nealeB/|Ben Neale]]
  * [[http://ibg.colorado.edu/cdrom2015/ruderfer/|Douglas Ruderfer]]
  * [[http://ibg.colorado.edu/cdrom2015/sham/|Pak Sham]]
  * [[http://ibg.colorado.edu/cdrom2015/sunyaev/|Shamil Sunyaev]]
  * [[http://ibg.colorado.edu/cdrom2015/tang/|Clara Tang]]

[[http://ibg.colorado.edu/cdrom2015/workshop2015.zip|Omnibus zip file]] containing all of the faculty files (573 megabytes).
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