homework_7_functional_annotation
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homework_7_functional_annotation [2015/12/02 15:43] scott /* Notes */ |
homework_7_functional_annotation [2015/12/03 14:21] scott /* Code for Homework */ |
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| ==== Notes ==== | ==== Notes ==== | ||
| - | BioFrontiers system admins have not installed ANNO just yet. Should be ready by class time tomorrow (12/3). | ||
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| # Some modules you'll need | # Some modules you'll need | ||
| module load tabix_0.2.6 | module load tabix_0.2.6 | ||
| - | module load anno | + | module load anno_1.0 |
| - | module load plink_latest | + | |
| # I encourage you to annotate your own genome, but for purposes of this | # I encourage you to annotate your own genome, but for purposes of this | ||
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| ### The following command tells me at how many sites this individual | ### The following command tells me at how many sites this individual | ||
| ### has a heterozygous stop gain allele: | ### has a heterozygous stop gain allele: | ||
| - | zgrep ' | + | zgrep ' |
| ### | ### | ||
homework_7_functional_annotation.txt · Last modified: 2015/12/03 14:22 by scott
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