Differences

This shows you the differences between two versions of the page.

--- homework_6_ancestry [2015/11/15 17:41]
scott
+++ homework_6_ancestry [2015/11/16 10:18] (current)
scott
@@ Line 40: / Line 40: @@
 module load apigenome_0.0.2
 module load plink_latest
+module load tabix_0.2.6
@@ Line 271: / Line 272: @@
 ### 'Self-reported' ancestry of 1000g participants
-kg_sf <- read.table('/Users/scvr9332/20130502.sequence.index', header=T, sep='\t', fill=T, stringsAsFactors=F)
+kg_sf <- read.table('/Users/scvr9332/PCA/20130502.sequence.index', header=T, sep='\t', fill=T, stringsAsFactors=F)
 sample_ids <- unique(data.frame(IID=kg_sf$SAMPLE_NAME, POPULATION=kg_sf$POPULATION, stringsAsFactors=F))

IBG Wiki