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catslife:start [2018/05/15 16:06]
corley [WHAT'S NEWI]
catslife:start [2024/03/28 09:53] (current)
gustavsd [Citing the Proper Grants]
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 ====== CATSLIFE WIKI ====== ====== CATSLIFE WIKI ======
 +
 +<note important>**11-Feb-2022**: Clicking to access a file through the mydms database storage system now requires additional credentials.  For subjects with an IBG workstation login, use those credentials to access mydms.  Please contact Jeff Lessem <jeff.lessem@colorado.edu> to obtain access credentials. </note>
  
 CATSLIFE was funded in 2015 to collect a new round of information from the CAP & LTS longitudinal samples and archive existing data into a unified database system.  Principal Investigators are Chandra Reynolds and Sally Wadsworth. Although LTS and CAP samples underwent different testing protocols before age 4, and subsequently to age 16, there is a high level of overlap in test materials between ages 4 and 16, and in the three waves of the CADD (Center on Antisocial Drug Dependence). CATSLIFE was funded in 2015 to collect a new round of information from the CAP & LTS longitudinal samples and archive existing data into a unified database system.  Principal Investigators are Chandra Reynolds and Sally Wadsworth. Although LTS and CAP samples underwent different testing protocols before age 4, and subsequently to age 16, there is a high level of overlap in test materials between ages 4 and 16, and in the three waves of the CADD (Center on Antisocial Drug Dependence).
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 ==== WHAT'S NEW ON THE WIKI ==== ==== WHAT'S NEW ON THE WIKI ====
  
-15-May-2018: Data update started for subjects tested through 31-Mar-2018. +=== 28-Jun-2023: Some summary scales added to self-report questionnaire === 
-  * Paper Forms updated 15-May-2018+ 
 +=== 10-Nov-2022: Restricted access for administrators to multi-project testing history === 
 + 
 +=== 06-May-2022: Data from CATSLife 2 is available for some assessments. See CATSLife 2 section below === 
 + 
 +=== 29-Oct-2021: Test years and ages corrected for DIS & PhenX eight additional cases.=== 
 + 
 +=== 25-Oct-2021: Eight additional cases added to DIS file (N=1512) === 
 + 
 +=== 22-Sep-2021: Nine additional cases added to DIS file (N = 1504).=== 
 + 
 +=== 22-Aug-2021: Data update completed for subjects tested through March 3, 2021 [End CATSLife 1]=== 
 +  * DIS interview updated 22-Aug-2021 (N = 1495) 
 +  * The paper form data updated 18-Jun-2021 (N=1257) 
 +  * PhenX interview updated 03-Aug-2021 (N = 1497) 
 +  * Qs updated 17-Aug-2021 (N = 1526/ 1319 for CATSLife Qs with 4 retests) 
 + 
 + 
 + 
 + 
 +=== 11-May-2021: New Entry system for CATSLife Project Proposals and updated list of current proposals === 
 + 
 +=== 29-Aug-2020: Slightly updated version of PRS data file posted with changes in CAP adoptee ethnicity (Formerly Asian ancestry recoded to Hispanic Mixed based on bio parent responses) === 
 + 
 +=== 06-Aug-2020: New version of the PRS data file is posted with new CATSLife genotype subjects present === 
 + 
 +=== 04-Jun-2020: SES documentation is stored in a new subfolder - See SES below === 
 + 
 +=== 26-Apr-2020: Data update COMPLETE for subjects tested through Feb. 29, 2020 === 
 +  * The paper form data has been updated thru this date (N=1227) 
 +  * DIS updated 21-Mar-2020 with total N = 1477 (190 repeats) 
 +  * PhenX updated 23-Mar-2020 with total N = 1479 (191 repeats, 4 excludable) 
 +  * Qs updated 22-Apr-2020 with total N = 1481 (195 repeats; 1271 CATSLife participants) 
 +  * Current address information from address sheets has been entered into address information database for all tested subjects through this date. Geocoding for newly entered current addresses sent to UCR. 
 + 
 +=== 14-Nov-2019: PRS scores for combined GWAS samples === 
 + 
 +A preliminary version of PRS scores for a combined multi-project, multi-platform imputed data set has been posted. See more at [[center:PRS|PRS scores]] 
 + 
 + 
 ==== Testing History ==== ==== Testing History ====
 +<note>Administrators only can access this testing history file (CADD1 to COMN)file</note>
 +
 +[[https://ibg.colorado.edu/mydms/out/out.ViewDocument.php?documentid=5592|Multi-project Testing History]] Through November 11, 2022
  
 Download these Excel spreadsheets to see the testing history by test year for each CAP or LTS subject: Download these Excel spreadsheets to see the testing history by test year for each CAP or LTS subject:
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-==== CATSLIFE-COLLECTED DATA ====+==== CATSLIFE-COLLECTED DATA (INCLUDING SELECTED fMRI DATA)====
  
 This series of files represents data collected directly under the CATSLIFE and/or the fMRI grants. This series of files represents data collected directly under the CATSLIFE and/or the fMRI grants.
 +
 +**Data Dictionary for CATSLife Wave 1** ({{ :catslife:catslife_codebook_dec21.docx | Codebook Updated Dec 2021}})
  
 |Paper forms (double-entered & verified) |[[https://ibg.colorado.edu/mydms/out/out.ViewDocument.php?documentid=4142|Download SPSS .sav file]] | |Paper forms (double-entered & verified) |[[https://ibg.colorado.edu/mydms/out/out.ViewDocument.php?documentid=4142|Download SPSS .sav file]] |
-|Self-reported Questionnaire (includes fMRI testing) |[[https://ibg.colorado.edu/mydms/out/out.ViewDocument.php?documentid=4155|Download SPSS .sav file]] |+|Self-reported Questionnaire (includes fMRI testing) |[[https://ibg.colorado.edu/mydms/out/out.ViewDocument.php?documentid=4155|Download SPSS .sav file]] | [[catslife:Instruments:Questionnaires| Questionnaires (in dev)]] | 
 +|Health and Sleep Questionnaire from fMRI testing |[[https://ibg.colorado.edu/mydms/out/out.ViewDocument.php?documentid=4689 |Download SPSS .sav file]] | 
 +|Pain and CESD Questionnaire from fMRI testing |[[https://ibg.colorado.edu/mydms/out/out.ViewDocument.php?documentid=4697 |Download SPSS .sav file]] | 
 +|Diagnostic Interview Schedule (GAD, MDD, ASPD) |[[https://ibg.colorado.edu/mydms/out/out.ViewDocument.php?documentid=4163|Download SPSS .sav file]] | 
 +|PhenX Substance Use Interview |[[https://ibg.colorado.edu/mydms/out/out.ViewDocument.php?documentid=4164|Download SPSS .sav file]] |  
 +|Executive Function Tests | [[https://ibg.colorado.edu/mydms/out/out.ViewDocument.php?documentid=5621 | Download SPSS .sav file]] | [[catslife:Instruments:Executive Function Tests]] | 
 +|Educational Attainment (ISCED) | [[https://ibg.colorado.edu/mydms/out/out.ViewDocument.php?documentid=5701 | Download SPSS .sav file]] |  | 
  
 <note>Two interviews remain missing from conducted PhenX interviews (01-Feb-2017)</note> <note>Two interviews remain missing from conducted PhenX interviews (01-Feb-2017)</note>
  
-|Diagnostic Interview Schedule (GAD, MDD, ASPD) |[[https://ibg.colorado.edu/mydms/out/out.ViewDocument.php?documentid=4163|Download SPSS .por file]] | +For additional data from and current status of the geocoding project, please contact Dr. Chandra Reynolds and her team. Selected census information from first and current addresses available here.  Access is currently restricted to identified members of the Geocoding working group: 
-|PhenX Substance Use Interview |[[https://ibg.colorado.edu/mydms/out/out.ViewDocument.php?documentid=4164|Download SPSS .sav file]] |+|SPSS census file for first addresses (2022 version:Individual/Family) |[[https://ibg.colorado.edu/mydms/out/out.ViewDocument.php?documentid=5607|Download SPSS .sav file]] | 
 +|SAS census file for first addresses (2019 version) |[[https://ibg.colorado.edu/mydms/out/out.ViewDocument.php?documentid=5537|Download SAS .sas7bdat file]] | 
 +|ReadMe file for updated SAS census file|[[https://ibg.colorado.edu/mydms/out/out.ViewDocument.php?documentid=5538|Download ReadMe text file]] | 
 +|SAS census file with current addresses (includes old first) |[[https://ibg.colorado.edu/mydms/out/out.ViewDocument.php?documentid=5489|Download SAS .sas7bdat file]] | 
 +|ReadMe file for SAS census file|[[https://ibg.colorado.edu/mydms/out/out.ViewDocument.php?documentid=5490|Download ReadMe text file]] | 
 + 
 +==== CATSLIFE2-COLLECTED DATA ==== 
 + 
 +|Self-reported Questionnaire |[[https://ibg.colorado.edu/mydms/out/out.ViewDocument.php?documentid=5562|Download SPSS .sav file]] | **Updated 07-Dec-2023**| 
 + 
 +|Concatenated Test My Brain |[[https://ibg.colorado.edu/mydms/out/out.ViewDocument.php?documentid=5579|Download SPSS .sav file]] | 
 + 
 +|Results from Quodit/Spatial Spy |[[https://ibg.colorado.edu/mydms/out/out.ViewDocument.php?documentid=5564|Download SPSS .sav file]] | 
 + 
 +|PhenX items, scales, & timings |[[https://ibg.colorado.edu/mydms/out/out.ViewDocument.php?documentid=5565|Download SPSS .sav file]] |  **Updated 12-Apr-2023**|
  
-For data from the geocoding project, please contact DrChandra Reynolds and her team.+|Raw form double-entry data |[[https://ibg.colorado.edu/mydms/out/out.ViewDocument.php?documentid=5580|Download SPSS .sav file]] | **Updated 04-Aug-2023**|
  
 +|Restricted-access cumulative dates file |[[https://ibg.colorado.edu/mydms/out/out.ViewDocument.php?documentid=5608|Download SPSS .sav file]] |  **Updated 12-Jan-2023**|
 ==== SCORING CATSLIFE-COLLECTED DATA ==== ==== SCORING CATSLIFE-COLLECTED DATA ====
  
-== Questionnaire Data ==+=== Questionnaire Data ===
  
   * IRI: Scoring instructions for the 28 Interpersonal Reactivity Index items found at:   * IRI: Scoring instructions for the 28 Interpersonal Reactivity Index items found at:
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 http://fetzer.org/sites/default/files/images/stories/pdf/selfmeasures/EMPATHY-InterpersonalReactivityIndex.pdf http://fetzer.org/sites/default/files/images/stories/pdf/selfmeasures/EMPATHY-InterpersonalReactivityIndex.pdf
  
 +=== SES ===
 +
 +  * [[catslife:SESinfo]] Contains documentation on the history of SES coding in CAP & LTS
 ==== ARCHIVED DATA ==== ==== ARCHIVED DATA ====
  
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 ==== CATSLIFE PUBLICATIONS ==== ==== CATSLIFE PUBLICATIONS ====
  
-Visit the publications page: [[catslife:publications:start|2015-2017]]+Visit the [[catslife:publications:start|publications page]] for links to PubMed and Google Scholar lists, as well as presentations and newsletters.
  
-Last NCBI update search conducted: **01-Feb-2017** 
-==== DOCUMENTS (includes meeting notes) ==== 
  
-Visit the CATSLIFE documents page: [[catslife:documents]] 
-====== Projects in Progress ====== 
  
-You can sort these info by Author, Title, Start Date & Last Update by clicking on those headers in the top row. For more information on an entry, including co-author info and detailed description, please click on the far right date link. If you need to edit an entry, please click on the far right link for that project and change the values on that page. 
  
-<note>If this is your first project entered, please email Robin Corley at robin.corley@colorado.edu after you have added with your wiki username in order to obtain data access. Data access requires a second login to a secure repository. </note>+==== DOCUMENTS ====
  
-==== Citing the Proper Grants ====+Visit the CATSLIFE [[catslife:documents]] page for cognitive scores alignment and geocoding data model.  
 +====== Projects in Progress ======
  
-When preparing manuscripts for publicationit is **very important** to cite the appropriate grants, and to have your mentors review your citationsTo aid in this process, Sally-Ann Rhea has prepared this WORD document to guide you to the proper grant acknowledgements.+As of 2023we are moved the Projects in Progress and Abstract submission sections to the top level of the wikiYou can find it [[https://ibg.colorado.edu/dokuwiki/doku.php?id=abstracts:start|here.]]
  
 +==== Citing the Proper Grants ====
  
-[[https://ibg.colorado.edu/mydms/out/out.ViewDocument.php?documentid=3840|Grant References Download ]] +When preparing manuscripts for publication, it is **very important** to cite the appropriate grants, and to have your mentors review your citationsPlease see the Grants page on the top of the IBG wiki for more information
-==== Add New Projects below this table ==== +
  
----- datatable ---- 
-cols    : Author,Title, Study, Start_date, Last_update, %pageid% 
-headers : Corresponding Author, Title, Study, Start Date, Last Update, More Info/Edit 
-max     : 20 
-filter  : type=CATSLIFE Projects in Progress 
-sort    : ^Start_date 
----- 
  
-<form> +[[https://ibg.colorado.edu/dokuwiki/doku.php?id=grants:start| IBG Grant Resource Page ]]
-action template catslife:projects:projecttpl catslife:projects:in_progress:+
  
-textbox "Database" ="CATSLIFE Projects in Progress" +[[https://ibg.colorado.edu/mydms/out/out.ViewDocument.php?documentid=3840|Grant References Word Document]] (older version created by Sally Ann Rhea)
-fieldset "Add Your Project" +
-select   "Study" "Please Select|CATSLIFE|LTS|BOTH"  +
-textbox  "Primary Author Name" +
-textbox  "Working Title" @ +
-textbox  "Potential Co Author(s) (enter none if not applicable)" +
-textarea "Description (4-5 sentences)" +
-textbox  "Sample(s)" +
-select   "Process Stage" "Idea Formulation|Analysis|Manuscript being written|Manuscript submitted|Manuscript in revision"  +
-textbox  "Start Date (YYYY-MO)"+
-textbox  "Last Update (YYYY-MO)"+
  
-submit 
-</form> 
catslife/start.1526422011.txt.gz · Last modified: 2018/05/15 16:06 by corley