====== Faculty Files ======

  * [[http://ibg.colorado.edu/cdrom2017/abdellaoui|Abdel Abdellaoui]]    
  * [[http://ibg.colorado.edu/cdrom2017/abecasis |Goncalo Abecasis  ]]    
  * [[http://ibg.colorado.edu/cdrom2017/barrett  |Jeff Barrett	]]      
  * [[http://ibg.colorado.edu/cdrom2017/bartels  |Meike Bartels	]]      
  * [[http://ibg.colorado.edu/cdrom2017/boomsma  |Dorret Boomsma	]]      
  * [[http://ibg.colorado.edu/cdrom2017/deleeuw  |Christiaan de Leeuw	]]      
  * [[http://ibg.colorado.edu/cdrom2017/evans    |Dave Evans	]]      
  * [[http://ibg.colorado.edu/cdrom2017/evansL   |Luke Evans	]]      
  * [[http://ibg.colorado.edu/cdrom2017/keller   |Matthew Keller	]]      
  * [[http://ibg.colorado.edu/cdrom2017/martinH  |Hilary Martin	]]      
  * [[http://ibg.colorado.edu/cdrom2017/martinN  |Nick Martin	]]      
  * [[http://ibg.colorado.edu/cdrom2017/medland  |Sarah Medland	]]      
  * [[http://ibg.colorado.edu/cdrom2017/minica   |Camelia Minica	]]      
  * [[http://ibg.colorado.edu/cdrom2017/nealeB   |Ben Neale	]]      
  * [[http://ibg.colorado.edu/cdrom2017/nealeM   |Mike Neale	]]      
  * [[http://ibg.colorado.edu/cdrom2017/posthuma |Danielle Posthuma  ]]    
  * [[http://ibg.colorado.edu/cdrom2017/poterba  |Tim Poterba	]]      
  * [[http://ibg.colorado.edu/cdrom2017/seed     |Cotton Seed	]]      
  * [[http://ibg.colorado.edu/cdrom2017/sham     |Pak Sham	]]      
  * [[http://ibg.colorado.edu/cdrom2017/vandongen|Jenny Van Dongen ]]   

[[http://ibg.colorado.edu/cdrom2017/2017-faculty.zip|All files]] in a zip archive (961 Megabytes).
====== Software ======

  - [[https://cran.r-project.org/|R]]
     - [[https://www.rstudio.com/|RStudio]]
     - [[https://cran.r-project.org/web/packages/gee/index.html|Gee]]
     - [[http://www.uni-regensburg.de/medizin/epidemiologie-praeventivmedizin/genetische-epidemiologie/software/index.html|EasyQC]]
  - [[https://www.cog-genomics.org/plink2|plink]]
     - [[http://zzz.bwh.harvard.edu/plink/|plink (the old show)]]
  - [[https://wp.sanger.ac.uk/barrettgroup/tag/evoker/|Evoker]]
  - [[https://www.broadinstitute.org/haploview/haploview|Haploview]]
  - [[http://genome.sph.umich.edu/wiki/Minimac|minimac]]
  - [[http://genome.sph.umich.edu/wiki/RAREMETALWORKER|RAREMETALWORKER]]
  - [[http://genome.sph.umich.edu/wiki/Metal|Metal]]
  - [[https://www.hsph.harvard.edu/alkes-price/eigensoft-frequently-asked-questions/|Eigensoft suite]]
  - [[http://cnsgenomics.com/software/gcta/|gcta]]
  - [[http://fuma.ctglab.nl/|Functional Mapping and Annotation of Genome-Wide Association Studies]]
  - [[https://ctg.cncr.nl/software/magma|MAGMA]]
  - [[http://uswest.ensembl.org/info/docs/tools/vep/index.html|Variant Effect Predictor]]
  - [[http://exac.broadinstitute.org/|ExAC Browser]]
  - [[http://www.ensembl.org/Homo_sapiens/|Ensembl]]
  - [[https://hail.is/|Hail]]