Differences

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--- uk_biobank:file_locations [2016/02/23 18:11] – Created page with "The files are on RC in <pre> /work/KellerLab/UKBiobank </pre>" lessem
+++ uk_biobank:file_locations [2016/02/29 18:29] (current) – scott
@@ Line 1: / Line 1: @@
 The files are on RC in
-  /work/KellerLab/UKBiobank
+/work/KellerLab/UKBiobank
+The phenotypes are in an Rdata file that can be read in with a line such as
+load(file="/work/KellerLab/UKBiobank/phenotypes/uk1653.Rdata")
+The data is all in an object called "bd".
+The raw genetic data is under the directory
+/work/KellerLab/UKBiobank/genetics/raw
+it is in vcf.gz, bed, and UK Biobank cal format in the so named directories.