uk_biobank:downloading_the_data
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uk_biobank:downloading_the_data [2016/02/29 11:22] scott /* Phenotypic data */ |
uk_biobank:downloading_the_data [2016/02/29 11:24] scott /* Genotypic data */ |
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| - Genetic data is downloaded following the instructions at [[http:// | - Genetic data is downloaded following the instructions at [[http:// | ||
| - Scripted downloads of all chromosomes were done using a command such as | - Scripted downloads of all chromosomes were done using a command such as | ||
| - | < | + | |
| $ seq 1 26 | parallel -j1 ./gfetch cal {} | $ seq 1 26 | parallel -j1 ./gfetch cal {} | ||
| $ seq 1 26 | parallel -j1 ./gfetch imp {} | $ seq 1 26 | parallel -j1 ./gfetch imp {} | ||
| - | </ | + | |
| - A single sample map (impv1.sample) for the imputed data also was downloaded | - A single sample map (impv1.sample) for the imputed data also was downloaded | ||
| - | < | + | |
| $ ./gfetch imp 1 -m | $ ./gfetch imp 1 -m | ||
| - | </ | + | |
uk_biobank/downloading_the_data.txt ยท Last modified: 2020/04/22 11:35 by luev6784
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