******************************************************************* * Genome-wide Complex Trait Analysis (GCTA) * version v1.95.1 Linux * Built at Feb 2 2026 16:51:42, by GCC 8.4 * (C) 2010-present, Yang Lab, Westlake University * Please report bugs to Jian Yang ******************************************************************* Analysis started at 05:44:14 MDT on Wed Jun 03 2026. Hostname: ip-10-0-200-228 Options: --bfile study2_qc --make-grm --out study2_grm --thread-num 4 The program will be running with up to 4 threads. Note: GRM is computed using the SNPs on the autosomes. Reading PLINK FAM file from [study2_qc.fam]... 1971 individuals to be included from FAM file. 1971 individuals to be included. 976 males, 995 females, 0 unknown. Reading PLINK BIM file from [study2_qc.bim]... 40479 SNPs to be included from BIM file(s). Computing the genetic relationship matrix (GRM) v2 ... Subset 1/1, no. subject 1-1971 1971 samples, 40479 markers, 1943406 GRM elements IDs for the GRM file have been saved in the file [study2_grm.grm.id] Computing GRM... 100% finished in 4.0 sec 40479 SNPs have been processed. Used 40479 valid SNPs. The GRM computation is completed. Saving GRM... GRM has been saved in the file [study2_grm.grm.bin] Number of SNPs in each pair of individuals has been saved in the file [study2_grm.grm.N.bin] Analysis finished at 05:44:18 MDT on Wed Jun 03 2026 Overall computational time: 4.26 sec.