PLINK v1.9.0-b.7.11 64-bit (19 Aug 2025) Options in effect: --file mydata --make-bed --out mydata Hostname: ip-10-0-200-228 Working directory: /home/loic/Day1 Start time: Tue May 19 00:06:04 2026 Random number seed: 1779170764 7846 MB RAM detected; reserving 3923 MB for main workspace. Scanning .ped file... done. Performing single-pass .bed write (12000 variants, 6000 people). --file: mydata-temporary.bed + mydata-temporary.bim + mydata-temporary.fam written. 12000 variants loaded from .bim file. 6000 people (3000 males, 3000 females) loaded from .fam. Using 1 thread. Before main variant filters, 5000 founders and 1000 nonfounders present. Calculating allele frequencies... done. Total genotyping rate is exactly 1. 12000 variants and 6000 people pass filters and QC. Note: No phenotypes present. --make-bed to mydata.bed + mydata.bim + mydata.fam ... done. End time: Tue May 19 00:06:07 2026