******************************************************************* * Genome-wide Complex Trait Analysis (GCTA) * version 1.94.0 beta Linux * (C) 2010-present, Jian Yang, The University of Queensland * Please report bugs to Jian Yang ******************************************************************* Analysis started at 12:38:19 UTC on Tue Jun 14 2022. Hostname: ip-10-0-201-15 Options: --bfile ozbmi --make-grm --out ozGRM Note: GRM is computed using the SNPs on the autosomes. Reading PLINK FAM file from [ozbmi.fam]... 1956 individuals to be included from FAM file. 1956 individuals to be included. 651 males, 1305 females, 0 unknown. Reading PLINK BIM file from [ozbmi.bim]... 9758 SNPs to be included from BIM file(s). Computing the genetic relationship matrix (GRM) v2 ... Subset 1/1, no. subject 1-1956 1956 samples, 9758 markers, 1913946 GRM elements IDs for the GRM file have been saved in the file [ozGRM.grm.id] Computing GRM... 100% finished in 1.0 sec 9758 SNPs have been processed. Used 9718 valid SNPs. The GRM computation is completed. Saving GRM... GRM has been saved in the file [ozGRM.grm.bin] Number of SNPs in each pair of individuals has been saved in the file [ozGRM.grm.N.bin] Analysis finished at 12:38:21 UTC on Tue Jun 14 2022 Overall computational time: 1.18 sec.