--buildver hg18 --vaast-simple-file examples/complex.gene.vaast.hg18 --excel --out kggseqtest3.cd --filter-model association # association --p-value-cutoff 0.00005 #only effective for 'association' filter-model --genome-anot --candi-list HLA-DPA1,HLA-DPB1 --ppi-anno string --ppi-depth 1 --pathway-anno cura --pubmed-mesh Crohn's+disease,Inflammatory+bowel+disease --qqplot #only effective for 'association' filter-model